Package index • pandemonium

All functions

Bikes: bikes with activations

chi2bins(): Bin points based on chi2

chi2score(): chi squared scores for the banomalies example

computeChi2(): Compute chi2 value for all points

computeSigma(): Compute sigma

getBenchmarkInformation(): Compute cluster information

getClusterDists(): Compute cluster distance summaries

getClusterStats(): Compute cluster statistics

getDists(): Compute distances between all points

makePlots(): Make plot as specified in settings

normCoords(): Normalisation coordinates

outsidescore(): outside score values

pandemonium(): Shiny app for exploring clustering solutions

plotChi2(): Plot chi2

plotCstat(): Plot selected cluster statistics

plotDimRed(): Plot dimension reduction plot

plotHeatmap(): Plot heatmap with dendrogram

plotObs(): Make coordinate plot

plotPC(): Make parallel coordinate plot

plotSigBin(): Plot sigma bins in parameter space

plotWC(): Show clusters in parameter space

pullCoords(): Chi-Squared Loss Function Coordinates

pullCoordsNoCov(): Generic Loss Function Coordinates

rawCoords(): Raw coordinates

tSNE(): t-Distributed Stochastic Neighbor Embedding Through Rtsne

tourMaker(): function to make tours

umap(): Uniform Manifold Approximation and Projection Embedding Through uwot

userCoords(): User defined coordinate function

writeResults(): Write space2, coordinates and cluter assingment to a CSV file