Write space2, coordinates and cluter assingment to a CSV file

Settings include: metric, linkage, k, plotType

Usage

writeResults(
  space1,
  cov,
  covInv,
  space2,
  exp,
  settings,
  filename,
  user_coord = NULL,
  user_dist = NULL,
  getCoords = normCoords
)

Arguments

space1

cluster space matrix

cov

covariance matrix

covInv

inverse covariance matrix

space2

space2 matrix

exp

observable reference value (e.g. experimental measurement)

settings

list specifying parameters usually selected in the app

filename

path to write the results file to

user_coord

input coordinate matrix (optional)

user_dist

input distance matrix (optional)

getCoords

function to calculate coordinates