Plot dimension reduction plot
plotDimRed.Rd
Plot dimension reduction plot
Usage
plotDimRed(
coord1,
coord2,
d_mat1,
d_mat2,
data,
colouring,
dimReduction,
algorithm,
group,
score,
user_group,
pch
)
Arguments
- coord1
coordinates in space 1
- coord2
coordinates in space 2
- d_mat1
distance matrix in space 1
- d_mat2
distance matrix in space 2
- data
either "space1" or "space2"
- colouring
either "clustering", "user", "bins" or "score"
- dimReduction
function to calculate dimension reduction with $Y being the new n x 2 matrix
- algorithm
name for algorithm used for labeling plot
- group
grouping of points from clustering
- score
score values and bins
- user_group
user defined grouping
- pch
factor with 2 levels 1 will be plotted as a circle 2 will be plotted as an o